results/JASPAR_2020_matrix_clustering/nematodes_CORE_+_UNVALIDATED/interactive_trees/JASPAR_2020_CORE_+_UNVALIDATED_matrix_clustering_nematodes_tables/alignment_table.tab


id name cluster strand offset_up offset_down width aligned_consensus aligned_consensus_rc
CORE_nematodes_m14_MA0919_1 dsc-1 cluster_1 D 1 0 11 -ryTAATTAry RYTAATTARY-
CORE_nematodes_m42_MA0928_1 zfh-2 cluster_1 D 0 0 11 artTAATTAgd HCTAATTAAYT
CORE_nematodes_m25_MA0923_1 lim-4 cluster_1 R 2 0 11 --YTAATTRSY rsYAATTAr--
CORE_nematodes_m41_MA0927_1 vab-7 cluster_1 R 2 1 11 --TTAATTAG- -cTAATTAa--
CORE_nematodes_m30_MA1442_1 mab-5 cluster_1 R 3 0 11 ---TAATTAAT ATTAATTA---
CORE_nematodes_m32_MA0924_1 pal-1 cluster_1 R 2 1 11 --TTWATTRC- -GYAATwAA--
CORE_nematodes_m26_MA1441_1 lim-7 cluster_1 D 0 0 11 AKMMATTAAGA tctTAATkkmt
CORE_nematodes_m1_MA1438_1 atf-7 cluster_2 D 1 0 11 -wrTGACGTsa TSACGTCAYW-
CORE_nematodes_m43_MA1704_1 zip-8 cluster_2 D 0 0 11 tkATGACGTCA TGACGTCATMA
NV_nematodes_m1_UN0105_1 *ceh-74 cluster_2 D 0 0 11 DKMCCTCACYW wrgTGAGGkmh
CORE_nematodes_m20_MA0920_1 fkh-2 cluster_3 D 3 2 13 ---rTAAACAa-- --TTGTTTAY---
CORE_nematodes_m21_MA1440_1 fkh-9 cluster_3 D 3 2 13 ---aAwAACAw-- --WTGTTWTT---
CORE_nematodes_m12_MA1446_1 daf-16 cluster_3 D 1 0 13 -wtGTAAACAcaw WTGTGTTTACAW-
CORE_nematodes_m33_MA0546_1 pha-4 cluster_3 D 0 3 13 wrwGyAAAyA--- ---TRTTTRCWYW
NV_nematodes_m2_UN0106_1 *lin-28 cluster_3 D 4 1 13 ----TTTATTTT- -AAAATAAA----
CORE_nematodes_m16_MA1701_1 elt-2 cluster_4 D 0 2 12 ttCTTATCAr-- --YTGATAAGAA
CORE_nematodes_m17_MA0542_1 elt-3 cluster_4 D 1 3 12 -TcTTATCA--- ---TGATAAGA-
CORE_nematodes_m18_MA1439_1 elt-6 cluster_4 R 2 2 12 --STTATCAS-- --sTGATAAs--
CORE_nematodes_m34_MA1703_1 pqm-1 cluster_4 R 1 0 12 -TSTTATCAGTW waCTGATAAsa-
CORE_nematodes_m6_MA1445_1 ceh-28 cluster_5 D 4 2 16 ----wwATCGATww-- --WWATCGATWW----
CORE_nematodes_m8_MA0921_1 ceh-48 cluster_5 D 5 2 16 -----rayCrATaw-- --WTATYGRTY-----
CORE_nematodes_m7_MA1699_1 ceh-38 cluster_5 D 0 0 16 AWTTATYGATTTTTYK mrAAAAATCrATAAwt
CORE_nematodes_m5_MA0264_1 ceh-22 cluster_6 D 1 0 12 -rCCACTTsAma TKTSAAGTGGY-
CORE_nematodes_m24_MA1449_1 hlh-30 cluster_6 D 0 0 12 wrTCACGTGAyw WRTCACGTGAYW
CORE_nematodes_m10_MA0260_1 che-1 cluster_7 D 0 0 6 GAArCS SGYTTC
CORE_nematodes_m27_MA0261_1 lin-14 cluster_8 D 0 0 6 GAACrc GYGTTC
CORE_nematodes_m3_MA1444_1 cebp-1 cluster_9 D 0 0 12 ATTTCGtAATaw WTATTACGAAAT
CORE_nematodes_m9_MA0922_1 ces-2 cluster_9 R 1 2 12 -TTAYRTAAT-- --ATTAyrTAA-
CORE_nematodes_m29_MA0262_1 mab-3 cluster_10 D 2 0 15 --AATGTTGCgwwwT AWWWCGCAACATT--
CORE_nematodes_m35_MA0547_1 skn-1 cluster_10 D 0 0 15 aAaATGATGAyAAww WWTTRTCATCATTTT
CORE_nematodes_m38_MA1443_1 unc-30 cluster_11 D 0 0 8 wTAATCCy RGGATTAW
CORE_nematodes_m36_MA0925_1 sma-4 cluster_12 D 2 0 13 --arTGTCTGGrc GYCCAGACAYT--
CORE_nematodes_m39_MA0918_1 unc-62 cluster_12 D 0 1 13 gAsmTGTCAytt- -AARTGACAKSTC
CORE_nematodes_m19_MA0543_1 eor-1 cluster_13 D 0 0 15 rrAGAGAsrsAGAsA TSTCTSYSTCTCTYY
CORE_nematodes_m2_MA0537_1 blmp-1 cluster_14 D 0 0 11 rAAArwGArAr YTYTCWYTTTY
CORE_nematodes_m23_MA0545_1 hlh-1 cluster_15 D 0 0 11 sAACAGCTGwY RWCAGCTGTTS
CORE_nematodes_m40_MA0926_1 unc-86 cluster_16 D 0 0 8 dTATGCAT ATGCATAH
CORE_nematodes_m37_MA0544_1 snpc-4 cluster_17 D 0 0 12 rTGTCGGCyGCt AGCRGCCGACAY
CORE_nematodes_m22_MA1448_1 fos-1 cluster_18 D 0 0 7 TGACTCA TGAGTCA
CORE_nematodes_m31_MA1451_1 nhr-6 cluster_19 D 0 0 8 AAAkGTCA TGACMTTT
CORE_nematodes_m13_MA0540_1 dpy-27 cluster_20 D 0 0 16 ysTCCCTkCGCgWwdr YHWWCGCGMAGGGASR
CORE_nematodes_m15_MA0541_1 efl-1 cluster_21 D 0 0 15 hrhksGCGssAAawt AWTTTSSCGCSMDYD
CORE_nematodes_m28_MA1450_1 lin-54 cluster_22 D 0 0 14 ggaAATTCAAATwt AWATTTGAATTTCC
CORE_nematodes_m11_MA0538_1 daf-12 cluster_23 D 0 0 15 GwGyGyGtkTGyktb VAMRCAMACRCRCWC
CORE_nematodes_m4_MA0263_1 ceh-10::ttx-3 cluster_24 D 0 0 14 ATTRGyTTmGTTAr YTAACKAARCYAAT