Detailed information of matrix profile UN0334.1

  1. Home
  2. Matrix > UN0334.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: ZNF549
Matrix ID: UN0334.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc finger factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation:
Uniprot ID: Q6P9A3  
Source: ReMap
Comment: not supported by literature

Sequence logo

Frequency matrix

         
A [ 705 1397 436 188 231 153 4295 78 105 3497 838 1002 ]
C [ 1780 889 75 98 177 4566 128 77 4489 498 1404 1575 ]
G [ 787 713 4133 4435 4364 80 175 4622 161 349 1430 1009 ]
T [ 1555 1828 183 106 55 28 229 50 72 483 1155 1241 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0334.1 UN0334 1 ZNF549 Homo sapiens
More than 3 adjacent zinc finger factors C2H2 zinc finger factors
     

-log(P-value) = -269.353

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: